Object for accessing the UI's main window functions. More...

Public Slots
void	signalChangeThemeMode ()
	Receives a signal from ThemeManager about a change in the Configuration UI to change the thread, or a signal from the theme monitoring thread that the system has automatically changed from Light to Dark mode. More...

void	loadDCM (string fileArg)
	Load DICOM via file list. More...

void	startDcmBrowser (string dir=string())
	Load DICOM browser from command line, optionally at a specific directory. More...

void	importBrukerMR (string directory=string())
	Imports a Bruker file via dialog box. More...

void	print ()
	Prompts a dialog message asking which Slice View the user wants an image of.

void	zoomIn ()
	Zooms in the Display.

void	zoomOut ()
	Zooms out of the Display.

void	normalSize ()
	Sets the slice images to their original size.

void	toggleFullScreen ()
	Switches the users viewer settings so that the entire computer screen displays VivoQuant.

void	showManual ()
	Opens the VivoQuant Manual.

void	saveImage ()
	Opens the 'Save Image' User Interface.

void	saveMovie ()
	Opens the 'Save Movie' User Interface.

void	scaleImage (float factor)
	Scales the images in the Display to a desired size. More...

void	showMinMaxTool ()
	Displays the 'Min/Max' Tool.

void	showWorklistTool ()
	Displays the 'Worklist' Tool.

void	showHistogram ()
	Displays the 'Histogram' tool User Interface.

void	bedRemoval ()
	Runs the 'Bed Removal' module.

void	advancedBedRemoval ()
	Opens the 'Bed Removal' tool User Interface.

void	matrixManipulationTool ()
	Opens the 'Matrix Manipulation Tool' User Interface. More...

void	showHints ()
	Opens the 'Hints' User Interface.

void	setupLayout2x2 ()
	Sets the Display layout to be 2x2.

void	setupLayout1x4 ()
	Sets the Display layout to be 1x4.

void	setupLayoutMIP ()
	Sets the Display layout to display only the MIP view.

void	setupLayoutTrans ()
	Sets the Display layout to display only the Transversal slice view.

void	setupLayoutSlice ()
	Sets the Display to the 'Slices Only' layout.

void	toggleCrosshair ()
	Toggles the Crosshair on/off.

void	setViewMode (int id)
	Sets the Viewmode to the desired mode. More...

void	showConfig ()
	Opens the 'Configuration' User Interface.

void	showCalibCTGeometrical ()
	Opens the 'NanoSPECT/CT Geometrical Calibration' User Interface.

void	showCalibMMP ()
	Opens the 'MultiPlexing-MultiPinhole Calibration' User Interface.

void	showDICOMDump ()
	Opens the DICOM header User Interface.

void	renameDICOM ()
	Opens the 'Rename DICOM files' User Interface.

void	relabelDICOMStudies (bool quiet=false)
	Opens the 'Relabel DICOM Series' User Interface. More...

void	anonymizeDICOM (bool quiet=false)
	Opens the 'DICOM Anonymizer' User Interface. More...

void	closeAnonymizeDICOM ()
	Closes the 'DICOM Anonymizer' User Interface.

void	closeDICOMRelabeler ()
	Closes the 'DICOM Relabeler' User Interface.

void	imageToCapture ()
	Opens the 'Open Image File' User Interface.

void	saveSession (string name=string(), bool quiet=false)
	Saves a VivoQuant session. More...

void	loadSession ()
	Opens the 'Load Session' User Interface.

void	loadSession (string name, bool quiet=false)
	Opens a VivoQuant session. More...

void	exportSession ()
	Opens the 'Export Session' User Interface to export a session to the current iPACS Repository in use.

void	toggleVCView ()
	Toggles on/off the 'Visual Control' tool

void	toggleMCView ()
	Toggles on/off the 'MIP Control' tool

void	toggleDMView ()
	Toggles on/off the 'Data Manager' tool

void	toggleMinMaxTool ()
	Toggles on/off the 'Min/Max' tool

void	toggleWorkflowWidget ()
	Toggles on/off the 'Workflow' tool

void	openFromIPACSDialog ()
	Opens the 'Open from iPACS Dialog' User Interface

void	undo ()
	"Un-does" the previous action completed in VivoQuant

void	redo ()
	"Re-does" the previous action completed in VivoQuant

void	resetView ()
	Resets the view transform for the current view.

void	showMModeSegmentationTool ()
	Opens the 'M-Mode Segmentation Tool' User Interface.

void	openCorthicknessTool ()
	Open Cortical Thickness Tool.

void	showStopRecordingButton ()
	Shows the 'Stop Recording' button.

void	removeStopRecordingButton ()
	Removes the 'Stop Recording' button.

void	updateRecTime (string stopRecTime)
	Updates the time on 'Stop Recording' button.

Public Member Functions
void	setViewMode (string vm, string op=string())
	Sets the view mode and the operator. More...

virtual QList< QAbstractViewWidget * >	getViews ()
	Get the currently active views. More...

Array< string >	saveImage (string filename, int objectType, int colBarType=0, int dcmRepType=0, int magnification=1, string cornerLabelTemplateName="")
	Saves an image of the specified plane. More...

Array< string >	saveMovie (string filename, int objectType, int colBarType=0, int dcmRepType=0, string cornerLabelTemplateName="")
	Saves a movie (.gif) of the desired planar or 3D view. More...

void	toggleMIP (bool toEnable)
	Turns the MIP viewer on or off. More...

void	installMouseRatAtlas ()
	Installs the default rodent atlas libraries.

void	setMessagePattern (string pattern)
	Change the message handler output format. Format options More...

Protected Member Functions
void	openFromIPACSFile (string filename)
	Opens a file from a known iPACS repository. More...

void	openFromIPACS (string url, bool urlFromFile=false)
	Download an ipacs file from an iPACS URL. More...

void	openFromIPACSZipacs (string url)
	Download a zipacs file from a zipacs URL.

void	showDICOMAnonymizer (int idx=-1, DataManager *dm=nullptr, bool quiet=false)
	Download DICOM files from an openin URL.

Friends
class	ScriptMaster

class	VisibilityManager

Detailed Description

Object for accessing the UI's main window functions.

This object can be used to perform toolbar related actions or to change the current view / operator.

See also ScriptMaster::mainWin() to obtain this object.

Member Function Documentation

◆ anonymizeDICOM

void anonymizeDICOM ( bool quiet = false )

slot

Opens the 'DICOM Anonymizer' User Interface.

Parameters

quiet Set to true to hide all popup dialog. The anonymization will automatically be applied to all dataset.

Note: See ScriptMaster::getDicomAnonymizer() to obtain the object

◆ getViews()

virtual QList<QAbstractViewWidget*> getViews ( )

virtual

Get the currently active views.

Returns: a list of the currently active views

◆ importBrukerMR

void importBrukerMR ( string directory = string() )

slot

Imports a Bruker file via dialog box.

Parameters

directory (Optional) The directory of the desired file on iPACS

◆ loadDCM

void loadDCM ( string fileArg )

slot

Load DICOM via file list.

Parameters

fileArg files to open

◆ loadSession

void loadSession	(	string	name,
		bool	quiet = `false`
	)

slot

Opens a VivoQuant session.

Parameters

name	The name of the VivoQuant session being loaded

◆ matrixManipulationTool

void matrixManipulationTool ( )

slot

Opens the 'Matrix Manipulation Tool' User Interface.

Note: See ScriptMaster::matrixManipulationTool() to obtain the object

◆ openFromIPACS()

void openFromIPACS	(	string	url,
		bool	urlFromFile = `false`
	)

protected

Download an ipacs file from an iPACS URL.

Parameters

url	The web URL of the desired file on iPACS
urlFromFile	Whether or not the url is from a .ipacs file

◆ openFromIPACSFile()

void openFromIPACSFile ( string filename )

protected

Opens a file from a known iPACS repository.

Parameters

filename The file name and path of the desired file to be opened by the function (eg: home/ipacs/projects/filename.txt)

◆ relabelDICOMStudies

void relabelDICOMStudies ( bool quiet = false )

slot

Opens the 'Relabel DICOM Series' User Interface.

Parameters

quiet Set to true to hide all popup dialog. The relabeling will automatically be applied to all dataset.

Note: See ScriptMaster::getDicomRelabeler() to obtain the object

◆ saveImage()

Array<string> saveImage	(	string	filename,
		int	objectType,
		int	colBarType = `0`,
		int	dcmRepType = `0`,
		int	magnification = `1`,
		string	cornerLabelTemplateName = `""`
	)

Saves an image of the specified plane.

Parameters

filename	The location and desired name of the image you are about to save (eg: C:/Desktop/filename.png)
objectType	The plane in which you would like to capture an image (eg: 0 = MIP, 1 = Sag, 2 = Cor, 3 = Tra)
colBarType	The color bar type (eg: 0 = none, 1 = no labels, 2 = simple labels, 3 = smar labels), Default is 0
dcmRepType	The Storage type (eg: 0 = Local image file, 1 = DICOM Secondary Capture), Default is 0
magnification	The Magnification factor for image, Default is 1
cornerLabelTemplateName	The name of an existing corner label template ("None" to save the image without any corner label), Default is an empty string

Returns

◆ saveMovie()

Array<string> saveMovie	(	string	filename,
		int	objectType,
		int	colBarType = `0`,
		int	dcmRepType = `0`,
		string	cornerLabelTemplateName = `""`
	)

Saves a movie (.gif) of the desired planar or 3D view.

Parameters

filename	The location and desired name of the .gif file you are about to save (eg: C:/Desktop/filename.png
objectType	The plane in which the movie will use for the fly-through (eg: 0 = MIP, 1 = Sag, 2 = Cor, 3 = Tra)
colBarType	The color bar type (eg: 0 = none, 1 = no labels, 2 = simple labels, 3 = smar labels), Default is 0
dcmRepType	The Storage type (eg: 0 = Local image file, 1 = DICOM Secondary Capture), Default is 0
cornerLabelTemplateName	The name of an existing corner label template ("None" to save the image without any corner label), Default is an empty string

Returns: A .gif file in the specified pathway

◆ saveSession

void saveSession	(	string	name = `string()`,
		bool	quiet = `false`
	)

slot

Saves a VivoQuant session.

Parameters

name	The desired name of the session being saved

◆ scaleImage

void scaleImage ( float factor )

slot

Scales the images in the Display to a desired size.

Parameters

factor The scaling factor, or the quantity in which the current image dimensions will be multiplied

◆ setMessagePattern()

void setMessagePattern ( string pattern )

Change the message handler output format. Format options

Parameters

pattern The pattern that will be used by log messages

◆ setViewMode [1/2]

void setViewMode ( int id )

slot

Sets the Viewmode to the desired mode.

Parameters

id	The corresponding desired viewmode (0 = Slice View, 1 = Tile View, 2 = Multi View, 3 = MPR View)

◆ setViewMode() [2/2]

void setViewMode	(	string	vm,
		string	op = `string()`
	)

Sets the view mode and the operator.

Parameters

vm	The desired viewer mode (Slice View, Tile View, Multi View, MPR View)
op	The operator within the view mode that is desired (Navigator, Reorientation/Registration, 3D ROI Tool, etc.)

◆ signalChangeThemeMode

void signalChangeThemeMode ( )

slot

Receives a signal from ThemeManager about a change in the Configuration UI to change the thread, or a signal from the theme monitoring thread that the system has automatically changed from Light to Dark mode.

This should be the main triggering to update the rest of the UI to match the intended theme.

◆ startDcmBrowser

void startDcmBrowser ( string dir = string() )

slot

Load DICOM browser from command line, optionally at a specific directory.

Parameters

dir	a directory to open to

◆ toggleMIP()

void toggleMIP ( bool toEnable )

Turns the MIP viewer on or off.

Parameters

toEnable A true/false value to instruct the function to turn the MIP on or off (True = on, False = off)

Public Slots

Public Member Functions

Protected Member Functions

Friends

Detailed Description

Member Function Documentation

◆ anonymizeDICOM

◆ getViews()

◆ importBrukerMR

◆ loadDCM

◆ loadSession

◆ matrixManipulationTool

◆ openFromIPACS()

◆ openFromIPACSFile()

◆ relabelDICOMStudies

◆ saveImage()

◆ saveMovie()

◆ saveSession

◆ scaleImage

◆ setMessagePattern()

◆ setViewMode [1/2]

◆ setViewMode() [2/2]

◆ signalChangeThemeMode

◆ startDcmBrowser

◆ toggleMIP()