AutoradCalibration Class Reference

Description

Tool for calibrating an autorad image.

This tool uses fiducials placed using either the Distance/Annotation Operator or the ROI operator to calibrate the image.

Open the tool with openAutoradCalib() on the Distance/Annotation operator (or openAutoradCalib() on the 3D ROI Tool operator), then obtain this object with getCalibrationWidget(). Before the tool is opened, getCalibrationWidget() returns undefined.

VQ.mainWin().setViewMode("Slice View", "Distance/Annotation");
var op = VQ.currentOp();
op.openAutoradCalib();
var calib = op.getCalibrationWidget();

Public Slots
void	run ()
	Run the tool.
void	fillConcentrations (Array< string > stdConcs, Array< string > recalcConcs)
	Fill the table of concentrations.
void	readValuesFromData ()
	Fill the table using currently loaded fiducials.
void	backgroundChanged (int newval)
	Update which fiducial is used as the background.
void	apply (bool quiet=false)
	Apply the calibration.

Public Member Functions
string	getStandardsCentersString ()
	Get the centers of the standards.
string	getStandardRadiusString ()
	Get the radii of the standards.
string	getStandardsColorString ()
	Get the colors of the standards.
string	getProcedureString ()
	Get the weights.
string	getSequenceString ()
	Get the sequence from the table.
string	getStandardsEquationString ()
	Get the equation with slope and intercept.
void	setProfilePlotDimensions (int width, int height)
	Set the dimensions of the profile plot.
float	getSlope ()
	Gets the calibration slope value.
float	getIntercept ()
	Gets the calibration intercept value.
float	getBackgroundMean ()
	Gets the calibration background mean value.
float	getFitR2 ()
	Gets the calibration r-squared fit value.

Member Function Documentation

apply

void apply ( bool quiet = false )

slot

Apply the calibration.

Parameters

quiet

(optional, default false) If false a popup message will display with the calibration parameters (slope and intercept)

backgroundChanged

void backgroundChanged ( int newval )

slot

Update which fiducial is used as the background.

Parameters

newval

the id of the new background

fillConcentrations

void fillConcentrations ( Array< string > stdConcs, Array< string > recalcConcs )

slot

Fill the table of concentrations.

Parameters

stdConcs	a list of the standard concentrations
recalcConcs	a list of the the recalculated concentrations

getBackgroundMean()

float getBackgroundMean ( )

inline

Gets the calibration background mean value.

Returns

The background mean value

getFitR2()

float getFitR2 ( )

inline

Gets the calibration r-squared fit value.

Returns

The r-squared value

getIntercept()

float getIntercept ( )

inline

Gets the calibration intercept value.

Returns

The intercept value

getSlope()

float getSlope ( )

inline

Gets the calibration slope value.

Returns

The slope value

setProfilePlotDimensions()

void setProfilePlotDimensions	(	int	width,
		int	height )

Set the dimensions of the profile plot.

Parameters

width	The width of the profile plot window
height	The height of the profile plot window