Overview

Use the 3D Brain Atlas Tool to perform brain region analysis. The tool can handle CT or MR data as the input and MR, PET, or SPECT for the input functional data.

Instructions for the use of the tool are available through the Workflow Assistant, which can be accessed via the Tools menu.

Workflow Assistant
Workflow Assistant

The brain atlas path location

The brain atlas path can be set via the Advanced Modules > Install Atlas > Change Atlas directory option. Typically the default path is located next to the VivoQuant cache:

Platform Default path
macOS ~/Library/VivoQuant/atlas
Ubuntu ~/.VivoQuant/atlas
Windows %appdata%/inviCRO/VivoQuant/atlas
Customizing the atlas path
Customizing the atlas path